CDS

Accession Number TCMCG048C04473
gbkey CDS
Protein Id XP_031263804.1
Location complement(join(266707..266752,266854..266943,267460..267584,267767..267947,268102..268295,268797..269200,269325..269407,269786..270066,270147..270680))
Gene LOC116122035
GeneID 116122035
Organism Pistacia vera

Protein

Length 645aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA578116
db_source XM_031407944.1
Definition general transcription and DNA repair factor IIH helicase subunit XPD isoform X2 [Pistacia vera]

EGGNOG-MAPPER Annotation

COG_category L
Description DNA repair helicase
KEGG_TC -
KEGG_Module M00290        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03021        [VIEW IN KEGG]
ko03400        [VIEW IN KEGG]
KEGG_ko ko:K10844        [VIEW IN KEGG]
EC 3.6.4.12        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko03022        [VIEW IN KEGG]
ko03420        [VIEW IN KEGG]
map03022        [VIEW IN KEGG]
map03420        [VIEW IN KEGG]
GOs GO:0006139        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006281        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006974        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009266        [VIEW IN EMBL-EBI]
GO:0009314        [VIEW IN EMBL-EBI]
GO:0009408        [VIEW IN EMBL-EBI]
GO:0009411        [VIEW IN EMBL-EBI]
GO:0009416        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0033554        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGATCTTCAAACTTGAAGATGTCACAGTTTATTTCCCGTACGATAACATCTACCCCGAGCAATATTCCTACATGCTCGAACTCAAGAGGGCTCTCGACGCCAAAGGCCACTGCCTTCTCGAGATGCCGACCGGCACCGGCAAGACCATAGCTCTCCTCTCTCTAATCACGAGCTACGCGCTTTCAAAGCCGGAGAACCCGATCAAGTTCGTTTACTGCACGCGCACTGTTCACGAAATGGAAAAGACTTTGGCCGAATTGAAGTTATTGCATAATTACCAGACTCGTCAATTGGGGCCCGCCGCCAAGATTCTTGCGATTGGATTGTCTTCCAGGAAGAATCTTTGCGTGAATTCTAGGGTTTTGGCTGCGGAGAATCGTGACTCCGTGGACGCCGCGTGTCGGAAACGGACCGCCAGTTGGGTTCGTGGCTTGGCTGCCGAGAATCCTAATGTGGAGACTTGTGAGTTCTTTGAAAATTACGAAAAGGCCGCTTCAGCGGCGGTTTTGCCTCCCGGGGTTTATACATTGCAGGATCTGAGAGCGTTTGGGAAGCAGAAAGGGTGGTGTCCGTACTTTTTAGCTAGGCACATGGTTCAATTTGCGAATGTGGTGGTTTATAGTTATCAGTACTTGCTTGACCCGAAGGTGGCTGGTATTATATCAAAGGAAATGCAGAAGGAGTCTGTTGTGGTTTTTGATGAGGCTCATAATATTGATAATGTGTGCATTGAAGCACTTAGTGTTAGTGTGAGGAGGCAGACGCTGGAAGGTGCCAACAGGAATCTTAATAGGATGAACCAGGAGATTGAAAGGTTCAAGGCCACTGATGCAGGTAGATTACGTGCTGAATACAACCGGCTTGTTGAGGGTTTGGCACTTAGAGGAAACCTGCCTATCGCAGACGCTTGGCTATCAAATCCTGCCTTACCGGATGATATTCTGAAGGAGGCTGTGCCCGGAAACATTCGCCGAGCTGAACATTTTCTGCATGTTTTACGTAGATTGGTCCAATATCTAAGAGGGCGCCTGGAAACTGAAAATGTTGAGAAGGAAAACCCTGTTAACTTTGTTGCATCCATTAATGCACATGCTGGAATTGACCAGAAAGCACTGAGGTTTTGTTATGATCGGTTGCACTCACTCATGTTGACACTGGAAATAACAGACACAGATGAGTTCTTACATATCCAGACAATATGTGACTTTGCAACACTTTTGGCAACTTACGCTCGTGGGTTTTCAATTATAATTGAACCTTTTGACGAGAGAATGCCTCATATTCCTGATCCTGTGCTGCAGCTTAGCTGCCATGATGCTTCTCTTGCCATAAAGCCTGTGTTTGACCGATTCCAGTCAGTTGTGATAACATCTGGAACACTAACCCCAATTGATCTCTACCCTCGTCTTCTTAATTTTCATCCAGTAGTCAGTCGAAGTTTTAAAATGTCGTTAACAAGAGATTGCATATGCCCTATGGTTCTTACTCGTGGAAGTGATCAACTTCCAGTGAGTACCAAATTTGATATGAGAAGCGATCCTGGTGTTGCAAGGAATTATGGAAAGCTCTTGGTGGAGATGGTCTCTATTGTTCCAGATGGGATTGTATGTTTTTTTGTTAGTTACTCATACATGGATGAAATAATTGCTACGTGGAATGATAGTGGAATTCTAAAGGAAATAATGCAACATAAGCTTGTCTTCATTGAGACACAGGATGTGGCAGAAACTACATTAGCTCTTGATAACTACCGTACAGCTTGTGATTGTGGGCGAGGTGCAGTCTTTTTCTCCGTTGCCAGGGGAAAAGTTGCAGAAGGTATAGATTTTGATGGACATTATGGCAGACTGGTTATCATGTTTGGCGTTCCTTTCCAGTACACATTAAGCAACTTTGCATTGTTGACTTATAGCAGGAGATGTTACACAATTTTGTGA
Protein:  
MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYALSKPENPIKFVYCTRTVHEMEKTLAELKLLHNYQTRQLGPAAKILAIGLSSRKNLCVNSRVLAAENRDSVDAACRKRTASWVRGLAAENPNVETCEFFENYEKAASAAVLPPGVYTLQDLRAFGKQKGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNIDNVCIEALSVSVRRQTLEGANRNLNRMNQEIERFKATDAGRLRAEYNRLVEGLALRGNLPIADAWLSNPALPDDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKENPVNFVASINAHAGIDQKALRFCYDRLHSLMLTLEITDTDEFLHIQTICDFATLLATYARGFSIIIEPFDERMPHIPDPVLQLSCHDASLAIKPVFDRFQSVVITSGTLTPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFVSYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVAETTLALDNYRTACDCGRGAVFFSVARGKVAEGIDFDGHYGRLVIMFGVPFQYTLSNFALLTYSRRCYTIL